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QuickBLASTP is an accelerated version of BLASTP that is very fast and works best if the target percent identity is 50% or more. BlastP simply compares a protein query to a protein database. PSI-BLAST allows the user to build a PSSM (position-specific scoring matrix) using the results of the first BlastP run.
- Standard Nucleotide BLAST
BLASTN programs search nucleotide databases using a...
- Accepted Input Formats
Note. 1 The degenerate nucleotide codes in red are treated...
- Blast
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- Saved Strategies
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- BLAST Info
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- Quick start
The blastn application searches a nucleotide query against a...
- Standard Nucleotide BLAST
22 lug 2024 · BLAST compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. Learn more about BLAST features, updates, databases, and cloud services.
23 giu 2008 · The blastn application searches a nucleotide query against a nucleotide database. To send the search to our servers and databases, add the –remote option: blastn –db nt –query nt.fsa –out results.out -remote. See more about this option in the section below, BLAST+ remote service.
23 giu 2008 · BLAST® Command Line Applications User Manual. See more... This manual documents the BLAST (Basic Local Alignment Search Tool) command line applications developed at the National Center for Biotechnology Information (NCBI).
BLAST è un algoritmo di bioinformatica per confrontare sequenze biologiche come proteine o DNA. Scopri come funziona, quali sono le sue fasi e i suoi collegamenti esterni.
The “blastn” program is a general purpose nucleotide search and alignment program that is sensitive and can be used to align tRNA or rRNA sequences as well as mRNA or genomic DNA sequences containing a mix of coding and noncoding regions.
This web page allows you to perform a global alignment of two nucleotide sequences using the Needleman-Wunsch algorithm. You can enter query and subject sequences, choose a database, set parameters, and view the results.